I am not positive but I always thought the COT is a calculation and is not an actual tempature sensor. I think it comes on at higher speeds like 90- 100 MPH and onward. If you remove the cats the car makes considerably more power so you would only be considered stock tune. I would contact Curt for a channel list. Especially if he is going to eventually tune your car.
If I ever do install the Mid Pipes I will be using the Big Daddies Catted O2 foolers. I am very happy with my Power so I am pretty sure if I do unlock my PCM to fix the shift hiccup we will be leaving the timing and fuel alone. First thing I want to do tune wise is to just fix the hiccup with minimal other changes and see how it runs. After all I never wanted to unlock and tune in the first place.
I am still fighting with FCA. The latest conversation I told the guy bottom line I am keeping the car (because it hauls ass) and either you are going to fix it or I am going to fix it. He says if I unlock the PCM I am modding the car and my Warranty will be restricted. I say fine then you fix it. Duh! I told him I don't think you can fix it. But he wants to make some calls to Engineers or whatever and maybe make another appointment for a Dealer visit.
@Markp